Pulmonary Fibrosis
Disease / Phenomenon
Pulmonary fibrosis is the progressive scarring of lung tissue, in which the thin, elastic walls of the alveoli are replaced by thick, stiff collagen. As scarring accumulates, the lungs lose compliance and oxygen transfer across the alveolar membrane becomes increasingly inefficient, producing breathlessness on exertion that worsens over time, a persistent dry cough, fatigue, weight loss, and in advanced disease clubbing of the fingers. Idiopathic pulmonary fibrosis has no identifiable cause and follows a particularly relentless course; other forms follow occupational dust exposure, autoimmune disease, radiation, certain medications, or hypersensitivity to inhaled antigens. The structural damage is permanent, so slowing progression is the central clinical objective.
The prevailing model begins with repeated micro-injury to alveolar epithelial type II cells in a susceptible, often aged lung. Injured epithelium fails to regenerate properly, undergoes senescence and endoplasmic reticulum stress, and releases mediators — TGF-beta above all, along with PDGF, CTGF, and Wnt ligands — that recruit and activate fibroblasts. These differentiate into myofibroblasts expressing alpha-smooth muscle actin, which deposit excessive collagen and fibronectin while matrix metalloproteinase and TIMP imbalance prevents its clearance. Oxidative stress, mitochondrial dysfunction, and telomere shortening contribute. This page decomposes these processes into their pathways and biomarkers.
Biological Processes of Pulmonary Fibrosis
Explore the key biological processes that drive pulmonary fibrosis, from cellular mechanisms through tissue-level responses.
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Inflammation
29 pathway(s)
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LPS/TLR4 Signaling
Target: NF-κB
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IL-17 Signaling
Target: RORYT
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NF-κB/ICAM-1 Signaling
Target: NF-κB
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NF-κB Signaling
Target: IκBα
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SOD/H2O2 Signaling
Target: O₂⁻
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MAPK Signaling
Target: IL-1, IL-11
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TNF-α Signalling
Target: TNF-α
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ERK/MAPK Signaling
Target: p-ERK
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cAMP/PKA Signaling
Target: A2A receptor
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RIG-1 Signaling
Target: RIG-1
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TNF-α/NF-κB Signaling
Target: TNF-α
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NRF2/Keap Signaling
Target: Nrf2
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MCP-1/RANTES Signaling
Target: IL-13
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JAK2/NF-κB Signaling
Target: JAK2
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Arachidonic Acid Signaling
Target: PGE2
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NLRP3 Signaling
Target: NLRP3
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TLR4/MyD88/NF-κB Signaling
Target: IκBα
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ACE2/MasR Signaling
Target: ACE2
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NF-κB/JAK 2 Signaling
Target: JAK 2
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PI3K/AKT Signaling
Target: PI3K
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TLR4/MyD88 Signaling
Target: HSP70
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NF-κB/MAPK Signaling
Target: p38 MAPK
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cAMP/Epac Signaling
Target: Epac
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HMGB-1/TLR4 Signalling
Target: HMGB-1
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cAMP Signaling
Target: Adenylyl Cyclase (AC)
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LPS Signaling
Target: TRPA1 Channel
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LPS/TLR Signaling
Target: p-JNK
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FcεRI/Lyn + Syk/MAPK Signaling
Target: p-Lyn
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Th2 Signaling
Target: IL-13
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Epithelial-Mesenchymal Transition
3 pathway(s)
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TGF-β Signaling
Target: TGF-β
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TK-mediated Smad2 Signaling
Target: Guanidinoacetate Methyltransferase (GATM)
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IL-6-induced STAT3/PD-L1 Signaling
Target: p-STAT3
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Apoptosis
12 pathway(s)
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ROS/Caspase-3 Signaling
Target: ROS
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Caspase-3 Signaling
Target: Bcl-2
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RO-induced Apoptotic Signaling
Target: ROS
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NF-κB Signaling
Target: NF-κB
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PI3K/AKT Signalling
Target: PI3K
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PI3K/AKT/mTOR Signaling
Target: STAT3
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EGFR Signaling
Target: AKT
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Caspase9/3 Signaling
Target: BAX/Bcl‐2
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Caspase Signaling
Target: Caspase-3
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Cytochrome C/Caspase-3 Signaling
Target: BCL-2
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Fas Signaling
Target: Fas death receptor
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PI3K/AKT/mTOR/CD1 Signaling
Target: EGFR
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Smooth Muscle Contraction
2 pathway(s)
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RhoA/ROCK Signaling
Target: MAPK
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Ca2+ Signaling
Target: MLCP
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Mucus Hypersecretion
5 pathway(s)
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Mucin Signaling
Target: Mucin 5
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PKC/EGFR/ERK Signaling
Target: PKC
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CHOP/MUC5AC Signaling
Target: ER stress/CHOP
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IL-13 Signaling
Target: IL-13
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EGFR Signaling
Target: Mucin 5
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Fibrosis
5 pathway(s)
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TGF-β/AKT/mTOR Signaling
Target: TGF-β
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TGF-β Signaling
Target: TGF-β
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Inflammatory Signaling
Target: IL-1β, TNF-α
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TGF-β/SMAD Signaling
Target: TGF-β1
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TGF-β1 Signaling
Target: SIRT1
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Bronchodilation
1 pathway(s)
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PDE4/PKC/Ca2+ Signaling
Target: PDE4
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Bronchoconstriction
2 pathway(s)
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Arachidonic Acid Signaling
Target: COX-2
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Metastasis
1 pathway(s)
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VEGF/VEGFR2 Signaling
Target: VEGF
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Cell Cycle Progression
1 pathway(s)
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EGFR Signaling
Target: AKT
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Oxidative Stress
2 pathway(s)
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AMPK/Nrf2/HO-1 Signaling
Target: p-AMPK
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Nrf2 Signaling
Target: Nrf2
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Tissue Remodelling
1 pathway(s)
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Wnt/β-catenin Signaling
Target: β-catenin
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Cell Proliferation
2 pathway(s)
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p21/cyclin D Signaling
Target: p21
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STAT1 Signaling
Target: p-STAT1
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Neutrophil Infiltration
1 pathway(s)
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ß2-integrin mediated Signaling
Target: ß2-Integrin
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Airway Hyperresponsiveness
1 pathway(s)
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Ova-induced Th2 Signaling
Target: IL-5R
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Chemoresistance
1 pathway(s)
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P-gp-Mediated Drug efflux Signaling
Target: P-glycoprotein
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Angiogenesis
1 pathway(s)
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HIF-1α Signaling
Target: VEGF
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Compounds affecting Pulmonary Fibrosis
Browse active compounds and their direct impact on pulmonary fibrosis biological processes, pathways, and biomarkers.
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From Eucalyptus
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Inflammation
SOD/H2O2 Signaling
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From Dried Ginger
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Inflammation
NLRP3 Signaling
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Inflammation
IL-17 Signaling
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From Dried Ginger
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Fibrosis
TGF-β1 Signaling
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Bronchodilation
PDE4/PKC/Ca2+ Signaling
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From Dried Ginger
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Apoptosis
EGFR Signaling
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Cell Cycle Progression
EGFR Signaling
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Angiogenesis
HIF-1α Signaling
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Mucus Hypersecretion
CHOP/MUC5AC Signaling
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Inflammation
Arachidonic Acid Signaling
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Mucus Hypersecretion
IL-13 Signaling
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Smooth Muscle Contraction
Ca2+ Signaling
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From Astragalus
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Inflammation
NRF2/Keap Signaling
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Inflammation
NF-κB/JAK 2 Signaling
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Inflammation
PI3K/AKT Signaling
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Inflammation
TLR4/MyD88 Signaling
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Inflammation
TLR4/MyD88/NF-κB Signaling
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Tissue Remodelling
Wnt/β-catenin Signaling
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Inflammation
ERK/MAPK Signaling
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From Licorice
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Inflammation
HMGB-1/TLR4 Signalling
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Epithelial-Mesenchymal Transition
TGF-β Signaling
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From Garlic
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Inflammation
JAK2/NF-κB Signaling
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Bronchoconstriction
Arachidonic Acid Signaling
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From Licorice
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Inflammation
LPS/TLR4 Signaling
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From Dong Quai
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Inflammation
TNF-α Signalling
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Mucus Hypersecretion
EGFR Signaling
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From Black Cumin
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Inflammation
cAMP/PKA Signaling
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Neutrophil Infiltration
ß2-integrin mediated Signaling
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From Licorice
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Inflammation
cAMP Signaling
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From Licorice
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Inflammation
LPS Signaling
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Inflammation
LPS/TLR Signaling
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Inflammation
NF-κB/ICAM-1 Signaling
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Apoptosis
ROS/Caspase-3 Signaling
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From Black Pepper
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Apoptosis
Caspase Signaling
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Apoptosis
RO-induced Apoptotic Signaling
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Apoptosis
NF-κB Signaling
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Inflammation
cAMP/Epac Signaling
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Mucus Hypersecretion
PKC/EGFR/ERK Signaling
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Fibrosis
TGF-β/AKT/mTOR Signaling
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From Garlic
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Inflammation
MCP-1/RANTES Signaling
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Fibrosis
Inflammatory Signaling
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Smooth Muscle Contraction
RhoA/ROCK Signaling
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Mucus Hypersecretion
Mucin Signaling
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Cell Proliferation
STAT1 Signaling
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Chemoresistance
P-gp-Mediated Drug efflux Signaling
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Fibrosis
TGF-β/SMAD Signaling
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Airway Hyperresponsiveness
Ova-induced Th2 Signaling
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Epithelial-Mesenchymal Transition
TK-mediated Smad2 Signaling
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Epithelial-Mesenchymal Transition
IL-6-induced STAT3/PD-L1 Signaling
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Inflammation
NF-κB/MAPK Signaling
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From Adathoda-Leaf
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Inflammation
FcεRI/Lyn + Syk/MAPK Signaling
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From Adathoda-Leaf
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Apoptosis
Cytochrome C/Caspase-3 Signaling
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Apoptosis
Fas Signaling
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Inflammation
Th2 Signaling
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Inflammation
MAPK Signaling
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From Dried Ginger
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Inflammation
NF-κB Signaling
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Oxidative Stress
AMPK/Nrf2/HO-1 Signaling
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From Black Cumin
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Inflammation
RIG-1 Signaling
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Fibrosis
TGF-β Signaling
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From Long Pepper
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Apoptosis
PI3K/AKT Signalling
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Apoptosis
Caspase9/3 Signaling
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Cell Proliferation
p21/cyclin D Signaling
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Inflammation
ACE2/MasR Signaling
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Apoptosis
PI3K/AKT/mTOR Signaling
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Metastasis
VEGF/VEGFR2 Signaling
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Oxidative Stress
Nrf2 Signaling
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Apoptosis
PI3K/AKT/mTOR/CD1 Signaling
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Ingredients affecting Pulmonary Fibrosis
Explore therapeutic ingredients and their constituent compounds that modulate pulmonary fibrosis biology.